Welcome to bioin’s documentation!¶
Contents:
- Getting Started
- API Documentation
- bioin.pattern_count
- bioin.frequency_map
- bioin.frequent_words
- bioin.reverse
- bioin.complement
- bioin.reverse_complement
- bioin.motif.count_motif
- bioin.motif.profile_motif
- bioin.motif.consensus_motif
- bioin.motif.score_motif
- bioin.motif.probability_profile
- bioin.motif.profile_most_probable_kmer
- bioin.motif.greedy_motif_search
- bioin.motif.count_with_pseudocount
- bioin.motif.profile_with_pseudocount
- bioin.motif.consensus_with_pseudocount
- bioin.motif.score_with_pseudocount
- bioin.motif.probability_with_pseudocount
- bioin.motif.profile_most_probable_kmer_with_pseudocount
- bioin.motif.greedy_motif_search_with_pseudocount
- bioin.motif.profile_probable_motifs
- bioin.motif.random_motifs
- bioin.motif.randomized_motif_search
- bioin.motif.normalize_probability
- bioin.motif.weighted_die
- bioin.motif.profile_generated_string
- bioin.motif.GibbsSampler
- bioin.replication.pattern_matching
- bioin.replication.symbol_array
- bioin.replication.faster_symbol_array
- bioin.replication.skew_array
- bioin.replication.minimum_skew
- bioin.replication.hamming_distance
- bioin.replication.approximate_pattern_matching
- bioin.replication.approximate_pattern_count